Library and machine learning assisted evolution of nanoparticles

Library and machine learning assisted evolution of nanoparticles

One of the key challenges for nucleic acid therapeutics is their delivery into cells. The embedding of nucleic acids in liposomal nanoparticles is often chosen for this purpose - a proven approach, which, however, still leaves open wishes with regard to uptake efficiency and cell/tissue specificity. WP4 applies defined test systems in which molecular libraries of carrier sequences or chemical modifications are iteratively investigated and developed for different applications (siRNA, mRNA, different organs and application routes).

Head: Ernst Wagner

PIs: Ernst Wagner, Olivia Merkel

 Industrial partner

Chemical modification of siRNAs for optimized delivery into target cells

Chemical modification of siRNAs for optimized delivery into target cells

While mRNA vaccines were important in the containment of the COVID-19 pandemic, no antivirals with sufficient efficacy are available against SARS-CoV2. The development of synthetic small interfering RNAs (siRNAs) against virally encoded RNAs has shown initial success, but currently no clinically approved siRNAs with antiviral efficacy are available. WP3 therefore aims to develop chemically modified siRNA conjugates and siRNA formulations with enhanced target specificity. We expect that the results of this WP will result in new approaches for siRNA-based therapy of other viral infections.

Head: Olivia Merkel

PIs: Olivia Merkel, Thomas Carell, Oliver Keppler, Sabine Schneider, Philip Tinnefeld

 Industrial partner

Peptide-coupled antisense oligonucleotides as a new class of antibiotics

Peptide-coupled antisense oligonucleotides as a new class of antibiotics

The widespread use of classical antibiotics carries the risk of multi-resistance and also leads to unwanted side effects such as damage to the natural bacterial flora. In this subproject, highly selective RNA antibiotics are being developed as a novel approach for the targeted control of pathogenic bacteria. Antisense oligonucleotides are coupled to peptides that bind to specific surface structures of the bacteria, thus enabling the oligonucleotide to be introduced.

Head: Jörg Vogel

 

ncRNA targeting in tumors and inflammation

ncRNA targeting in tumors and inflammation

WP7 focuses on the observation that macrophages may have a significant role in the development of certain tumors, thus linking them to inflammatory processes. There is increasing evidence that long non-coding RNAs (lncRNAs) control essential functions of macrophages and thus have therapeutic potential. Building on a CRISPR-Cas-based screening of thousands of lncRNAs established by AG Rad, suitable targets will be identified and eventually antisense oligonucleotides against these lncRNAs will be developed.

Head: Roland Rad

PIs: Roland Rad, Stefan Engelhardt, Annalisa Marsico, Gunther Meister, Michael Sattler

 Industrial partner

microRNA-based therapy of COPD

microRNA-based therapy of COPD

Chronic obstructive pulmonary disease (COPD) is the third leading cause of death worldwide. Currently, there is no therapy that can interfere with the underlying inflammatory processes of COPD. Preliminary work on WP6 showed that the alveolar macrophage and its non-coding RNAs (ncRNAs) have a central role in the development of COPD. The aim of this WP is to develop antisense oligonucleotides against ncRNAs that, by coupling to a ligand, achieve enhanced uptake in alveolar macrophages and thus locally increased drug levels.

Head: Stefan Engelhardt

PIs: Stefan Engelhardt, Ali Önder Yildirim

 Industrial partner